spacipy
latest
Quick start
Installing guide
Basic Usage
Tutorial
Handle gem files for downstream analysis
Handle mask (or image) files for downstream analysis
Maximum intensity Projection (MIP) plot
API
Gem
Stoarr
spacipy
Index
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Index
_
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A
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B
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C
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F
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G
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I
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M
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P
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R
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S
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T
_
__init__() (spacipy.Gem method)
(spacipy.Stoarr method)
A
alpha_shape() (spacipy.Stoarr method)
B
binning() (spacipy.Gem method)
C
center (spacipy.Gem property)
concat() (spacipy.Stoarr method)
contour_slice() (spacipy.Stoarr method)
F
find_boundaries() (spacipy.Stoarr method)
G
Gem (class in spacipy)
I
img_shape (spacipy.Gem property)
M
mask() (spacipy.Gem method)
mip_spatial() (in module spacipy)
P
padding() (spacipy.Stoarr method)
plot() (spacipy.Gem method)
(spacipy.Stoarr method)
R
readin() (spacipy.Gem class method)
rearrange() (spacipy.Gem method)
relocation() (spacipy.Gem method)
roi() (spacipy.Gem method)
rotation() (spacipy.Stoarr method)
S
stat() (spacipy.Gem method)
Stoarr (class in spacipy)
T
to_anndata() (spacipy.Gem method)
to_img() (spacipy.Gem method)
to_matrix() (spacipy.Gem method)
to_triplet() (spacipy.Stoarr method)